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Gene Therapy's 'Right On Track'
Two ground-breaking clinical trials -- both in young children suffering from severe combined immune deficiency (SCID) -- stand like bookends on the shelf containing the written record of gene therapy's history. These two trials -- conducted 10 years apart -- represent the best of gene therapy. Together, they prop up the accumulated volumes of data that trace its evolution. One book details the rise and fall of gene therapy companies; another outlines the grand plans for hundreds upon hundreds of small clinical trials. One treatise documents the frustrating setbacks (and modest successes) encountered by researcher and clinician alike during these trials; yet another covers the ongoing dilemma of regulatory oversight.
But among them all, there's one volume that stands apart as a genuine tragedy -- the 1999 death of Jesse Gelsinger, the first to die as a direct result of gene therapy. That the Gelsinger book is not the bookend itself serves to remind us that gene therapy researchers (and regulators) have learned, and learned well, from this grave misfortune. Gelsinger's death was a blaring wake-up call and put everyone on alert -- researchers, institutions, the FDA, the U.S. Senate and the public. Patient safety has become the primary objective of each and every trial, and the clinical endpoints are now clearly defined, explained Inder Verma, outgoing president of the American Society of Gene Therapy (ASGT).

Challenges still abound, too: Researchers don't fully understand how to control gene expression levels, for instance. And it's now clear that the immune system can react to both the vectors and the genes (the cause of Gelsinger's death). In fact, according to Verma, a genetics professor at the Salk Institute, "Many suspect that immunology will be the bane of gene therapy for a long time."
Nonetheless, gene therapists have made great strides in understanding the systems with which they work. There are many methods for delivering genes, for instance, and it's now known that each has its place --depending on the disease, the target tissue and other factors. Speaking at the 4th annual meeting of the ASGT in Seattle last month, Verma explained that "The concept of gene therapy is disarmingly simple, but the method of delivering a gene has become an art."
Representative Gene Therapy Trials
|
Company
|
Product Name
|
Delivery*; Gene
|
Mode Of Delivery
|
Disease
|
Clinical Phase
|
|
Avigen; Bayer
|
Coagulin B
|
AAV; Factor IX
|
Intramuscular injection
|
Hemophilia B
|
Phase I/II
|
|
Avigen; Bayer
|
Coagulin B
|
AAV; Factor IX
|
Infusion into liver artery
|
Hemophilia B
|
Phase I/II
|
|
Cell Genesys; Japan Tobacco
|
GVAX
|
Vaccine: Patient-specific; tumor cells genetically modified to secrete
GM-CSF, irradiated, then injected into patients
|
Intradermal
|
Non small-cell lung cancer
|
Phase I/II
|
|
Cell Genesys; Japan Tobacco (prostate only)
|
GVAX
|
Vaccine: Non-patient-specific; tumor cells genetically modified to secrete
GM-CSF, irradiated, then injected into patients
|
Intradermal
|
Prostate cancer; pancreatic cancer; myeloma
|
Phase II (prostate); Phase I/II (pancreatic, melanoma)
|
|
Enzo Biochem
|
HGTV43
|
Antisense blocker of HIV-1 genes tar and tat/rev, transduced into HIV-infected
patient's blood stem cells
|
Infusion
|
AIDS
|
Phase I
|
|
GenVec; Pfizer
|
BIOBYPASS angiogen
|
AV; VEGF
|
Direct injection into heart (for CAD)
|
Coronary artery disease and peripheral vascular disease
|
Phase II
|
Notes: * AV = adenovirus; AAV = adeno-associated virus; SYN = synthetic (lipid; polymer)
As well, there have been several conceptual shifts in the last decade: Like researchers developing other sorts of therapies, there's a realization that these treatments don't always have to represent cures. Often, an improvement in the quality of a patient's life is a noble end. And, the timelines for product development turn out to be no different than for any other sort of drug: Given that development can take 15 years from start to finish, gene therapy's right on track. In fact, genes themselves are just another type of drug -- and gene therapy is a way to deliver them.
Importantly, some potential treatments have shown extremely promising results in clinical trials. For instance, Onyx Pharmaceuticals Inc.'s anti-cancer product ONYX-015 (which is now in Phase III trials) was able to reduce the tumor size by at least 50 percent in 11 of 30 patients with head and neck cancer in a Phase II study. Cell Genesys Inc.'s GVAX lung cancer vaccine elicited a major response rate in 18 percent of the patients enrolled in a Phase I/II trial. And two of the severely ill patients receiving Transkaryotic Therapies Inc.'s ex vivo gene therapy for hemophilia A in a Phase I trial had no spontaneous bleeding episodes for at least 10 months after the treatment. Clinical results are starting to emanate from many other trials, as well, clearly evidenced by the number of presentations at last month's ASGT meeting. (The tables in this article list a representative [and small] sample of the many gene therapy trials being conducted by biotech companies.) But no trial has yet to match the stunning success of Alain Fischer's SCID trial -- which many are heralding as a downright cure.

In this landmark trial -- the current bookend on the gene therapy shelf -- French researchers treated five baby boys, all less than one year old, who were born with X-linked SCID, a very rare form of the disease. The researchers infected progenitor cells isolated from the boys' bone marrow with a retrovirus containing the gamma-c gene, which encodes part of a cell-surface receptor found on T cells and natural killer (NK) cells. This receptor is important in binding cytokines, Fischer explained. "Its function is to induce cell proliferation."
"We initiated the trial about two years ago, and five patients were treated in the first trial. There were no adverse effects," Fischer said in remarks at a press conference held during the ASGT meeting. Not only that, but in four of five patients, "we were able to reconstitute a normal immune system." And, 26 months later, they're still OK. "So far, so good," Fischer said. But, he cautioned, "This is not necessarily a cure. It's still possible that we'll see a silencing of gene expression." Moreover, since it's unknown exactly which precursor cells received the gene -- nor their state of maturation at the time -- it's premature to claim that the therapy will last forever. Still, since T cells have a life span of 10 to 20 years, according to Fischer, the benefit may well last that long. The French group started a second trial on two patients in May 2001. "Our goal is to treat more patients."
Even if the treatment turns out not to be a cure, the results have already proved one very important point: They demonstrated for the first time that it is, indeed, possible to correct a disease by means of gene therapy.
Representative Gene Therapy Trials
|
Company
|
Product Name
|
Delivery*; Gene
|
Mode Of Delivery
|
Disease
|
Clinical Phase
|
|
GenVec; Varian
|
TNFerade
|
AV; TNF-alpha and radiation-responsive promoter
|
Intratumoral
|
Cancer (+ radiation therapy)
|
Phase Ib
|
|
Genzyme Biosurgery
|
HIF-1 alpha
|
AV; Hypoxia-inducible factor-1
|
Injection into heart muscle
|
Coronary artery disease in patients undergoing bypass graft surgery
|
Phase I
|
|
Genzyme Molecular Oncology
|
Melanoma Vaccine
|
AV; melanoma antigens MelanA/MART and gp100
|
Intradermal
|
Melanoma
|
Phase I/II
|
|
Introgen
|
INGN 201
|
AV; p53 tumor suppressor gene
|
8 routes: Injections into various organs and tissues; instillation into
bronchial tree; mucosal infiltration into healthy surgical wound margins;
repeated direct intravenous infusion
|
Cancer
|
Phase III head and neck cancer;
Phase II lung cancer;
Phase I additional cancers
|
|
Introgen
|
INGN 241
|
AV; mda-7 tumor suppressor gene
|
Intratumoral
|
Solid tumors
|
Phase I
|
|
Onyx Pharmaceuticals; Pfizer
|
ONYX-015
|
AV; replicates in and kills tumor cells deficient in p53 tumor suppressor
gene product
|
Intratumoral injection
|
Head and neck cancer (+ chemotherapy)
|
Phase III
|
Notes: * AV = adenovirus; AAV = adeno-associated virus; SYN = synthetic (lipid; polymer)
That wasn't the case in the first SCID trial -- which earned its place in history precisely because it was the first time that a therapeutic gene therapy procedure was performed in humans. In September 1990, two little girls suffering from adenosine deaminase (ADA) deficiency -- one of the genetic causes of SCID and potentially fatal -- received regular infusions of their own T cells transfected with a retroviral vector carrying the human gene responsible for producing ADA. The procedure, performed by French Anderson, Michael Blaese and Kenneth Culver, was repeated every month or two over the next year or two. Gene transfer was more efficient in one child than it was in the other, but 10 years later (and presumably today, as well), the two girls appeared to be healthy and have functional immune systems. However, clinical evaluation of those early trials is still hampered by the fact that the patients also received regular replacement of the enzyme via the drug PEG-ADA -- and they still do.

Interestingly, both SCID trials used retroviral vectors to transfect the patients' own cells ex vivo. There are some differences between the two, but generally speaking "The technology is not that different now than it was 10 years ago," explained Barrie Carter, executive VP and CSO at Targeted Genetics Corp. "The fundamental technology in 1990 was essentially usable as it was." Thus, even 10 years ago, gene therapists were on the right track: When retroviral vectors were correctly applied, they worked fine as gene delivery mechanisms.
But, as researchers subsequently discovered, retroviral vectors don't work in every case. And neither do the other delivery vehicles, which today include adenoviruses, adeno-associated viruses and synthetic carriers (usually lipid-based). The raging debates about which delivery vector was the right one to use have gradually dissipated as researchers came to realize that there is no one answer. Instead, they now appreciate the fact that gene therapy has to be customized: "You have to understand the disease target, which [delivery] system is useful and which is appropriate," Carter said.
Representative Gene Therapy Trials
|
Company
|
Product Name
|
Delivery*; Gene
|
Mode Of Delivery
|
Disease
|
Clinical Phase
|
|
Targeted Genetics; Celltech Group
|
tgAAVCF
|
AAV; CFTR
|
Aerosolized
|
Cystic fibrosis
|
Phase II
|
|
Targeted Genetics
|
E1A-Lipid Complex
|
SYN; E1A tumor inhibitor gene
|
Intratumoral injection
|
Head and neck cancer
|
Phase II
|
|
Transkaryotic Therapies
|
Transkaryotic therapy
|
Non-viral; Factor VIII
|
Patient's own cells genetically engineered ex vivo to express
Factor VIII and then implanted in the abdomen
|
Hemophilia A
|
Phase I
|
|
Valentis; Roche
|
IL-2 gene medicine
|
SYN; cationic lipid; IL-2
|
Intratumoral
|
Advanced head and neck cancer
(+ chemotherapy)
|
Phase IIb
|
|
Vical
|
Allovectin-7
|
DNA/lipid complex; HLA-B7 antigen
|
Intratumoral
|
Melanoma
|
Phase II
|
Notes: * AV = adenovirus; AAV = adeno-associated virus; SYN = synthetic (lipid; polymer)
The immune response to vectors and genes themselves, however, looms far above even these considerations. "If the gene [you're trying to correct] has been deleted to begin with, then there's an immune reaction to the transgene," Carter continued. On the other hand, if the defective gene exists in the patient, but carries a point mutation or a frameshift -- as is the case for cystic fibrosis -- then an immune reaction is very unlikely. "Those patients' immune systems have basically seen all the mutations, so the transgene is not perceived as an antigen." There may even be an immune reaction to the transgene's protein product. The viral vectors, of course, have (foreign) protein capsids, which the immune system is primed to attack.
One possible solution to this problem might be to teach the immune system not to respond, i.e., to induce immune tolerance, said Jeffrey Bluestone, director of the diabetes center at the University of California San Francisco. Speaking at the ASGT meeting, Bluestone explained that immune tolerance, in which there is a lack of pathogenic reactivity to self and foreign proteins in the absence of ongoing treatment is different than immunosuppression, a transient effect in the presence of a drug. And there are several major approaches to inducing immune tolerance already under investigation -- some of which are in the clinic, though not yet in a gene therapy setting. (For a detailed explanation of immune tolerance, see the Signals article, "Gambling On Immune Tolerance.") But whether gene therapy will work better in combination with immune tolerance, or immunosuppression -- or even no attempt to suppress the immune response -- "depends on the gene, the vector and the disease," Bluestone concluded.
Controlling expression levels of the transgene is another major challenge facing gene therapists today. "Many proteins, such as EPO and insulin, need to be tightly regulated," Carter said. "It's still tough to get the molecular biology to work and to get the gene into the right cells." Approaches being tried include using tissue-specific promoters, which will restrict gene expression to one particular cell type, or even regulating the transgene by coupling it with a promoter that responds to an exogenous signal (an already approved drug, such as tetracycline, that can be taken to turn the promoter on and off as needed).
And research on gene expression conducted by Mark Groudine, director of the basic science division of the Fred Hutchinson Cancer Research Center in Seattle, has shown that a gene's location within the cell's nucleus may be a very important factor in gene expression. Groudine, who studies gene expression during hematopoiesis, has determined that a gene's "proximity to heterochromatin [the condensed areas of the DNA/protein complex found in nuclei] correlates with the repression of gene expression." Speaking at the ASGT meeting, Groudine concluded that "There are sites in the genome that support very stable gene expression. This is important to consider when thinking about gene therapy."

But these challenges, formidable as they might be, "are not blocking progression in gene therapy," Carter said. In fact, according to Savio Woo, of Mt. Sinai School of Medicine, over the last decade the field has seen "an evolution of technical obstacles." Earlier hurdles -- delivering the genes in the first place, for instance, or coaxing them to express functional proteins -- have been surmounted. One has to assume that researchers will also overcome the current challenges. In this way, "The process of developing gene drugs is no different than developing regular drugs," Woo added.
And, predicts Francis Collins, the two will end up competing with each other. Speaking at the ASGT meeting, Collins, director of the National Human Genome Research Institute, said "Already, 1,000 disease genes have been identified; we'll find a genetic contribution for all the major diseases. By 2020, we should see the introduction of gene therapies and drug therapies for most [of them]. People in gene therapy will be involved in a race with the drug therapy people to see who gets there first."

originally published 07/20/2001 |